BIOCOMP 2007:
Las Vegas,
Nevada,
USA
Hamid R. Arabnia, Mary Qu Yang, Jack Y. Yang (Eds.):
International Conference on Bioinformatics & Computational Biology, BIOCOMP 2007, Volume II, June 25-28, 2007, Las Vegas Nevada, USA.
CSREA Press 2007, ISBN 1-60132-041-8 
Bioinformatics and Medical Informatics Software Tools
- Kerstin Denecke, Jochen Bernauer:
Extracting Specific Medical Data Across Multiple Languages.
309-315
- Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence, Douglas Jennewein, Volker Brendel:
Creating Bioinformatic Workflows within the BioExtract Server.
316-322
- Bernhard Pfeifer, Johannes Aschaber, Christian Baumgartner, Stephan Dreiseitl, Robert Modre, Günter Schreier, Bernhard Tilg:
A data warehouse for prostate cancer biomarker discovery.
323-327
- Guna Sekaran Gurusamy, Tapas Kumar Basak, P. T. Kalaichelvan:
Bio Informatics for Disease Associated with Bone Marrow Depression.
328-333
- Zhiming Wang, Xin Gao, Cong-Zhou He, John A. Miller, Jessica C. Kissinger, Mark Heiges, Cristina Aurrecoechea, Eileen Kraemer, Cary Pennington:
A Comparison of Federated Databases with Web Services for the Integration of Bioinformatics Data.
334-338
- Mehrdad Sharbaf:
Biometric Authentication: A Pragmatic Model to Measure Effectiveness of Biometric System in Information Systems Security.
339-344
Prediction of Structure and Dynamics of Macro Molecules
- Mohammad Al Bataineh, Maria Alonso, Guillermo Atkin, Siyun Wang, Wei Zhang:
An Optimized Ribosome Binding Model Using Communication Theory Concepts.
345-348
- Junilda Spirollari, Jason T. L. Wang, Yongkyu Park:
A New Algorithm for RNA Secondary Structure Prediction.
349-354
- Saad Osman Abdalla Subair, Safaai Deris:
Blind Test Is A Pragmatic Test for A New Protein Secondary Structure Classifier.
355-361
- Arvind Gupta, Mehdi Karimi, Alireza Hadj Khodabakhshi, Ján Manuch, Arash Rafiey:
Design of Artificial Tubular Protein Structures in 3D Hexagonal Prism Lattice Under HP Model.
362-369
- Paul D. Yoo, Bing Bing Zhou, Albert Y. Zomaya:
Machine Intelligence in Protein Sequence Analysis and Structure Prediction.
370-377
- Aleksandar Poleksic, Joseph F. Danzer:
Protein side-chain modeling using a combination of knowledge and energy based approaches.
378-382
- Jing Zhang, Maozu Guo, Yang Yu:
Methods and Simulations for the Protein Folding.
383-386
- Jing Zhang, Maozu Guo, Yang Yu:
Simulations of Protein Folding Process.
387-391
- Chandrasekhar Mamidipally, Santosh B. Noronha, Sumantra Dutta Roy:
A Novel Method for Feature Identification of Proteins.
392-399
- Navita Srivastava, Arti Saxena, Rajeev Prithiani:
Neural Networks for Predicting Structural Classification of Protein from Primary Structure.
400-406
- Oyun-Erdene Namsrai, Kwang Su Jung, Sunshin Kim, Keun Ho Ryu:
Characterizing Pseudobase and Predicting RNA Secondary Structure with Simple H-Type Pseudoknots Based on Energy Model.
407-410
- Xiongwu Wu, Bernard Brooks:
Modeling Of Macromolecular Assemblies with Map Objects.
411-420
Metablomics,
Proteomic and Protein Function Prediction
- Liangjiang Wang:
A Semi-Supervised Learning Approach for Prediction of DNA-Binding Residues in Protein Sequences.
421-426
- Jianwen Fang, Nazila Salamat-Miller, Yinghua Dong, C. Russell Middaugh:
Prediction of Polyanion Binding Potential in Proteins Using Random Forest.
427-431
- Jack Horner:
Primary-Structure/Qseltamivir-Inhibition Correlations in Influenza-H5N1-Related Neuraminidases.
432-438
- Aleksey A. Porollo, Baoqiang Cao, Jaroslaw Meller:
Biases in Lipid Accessibility Prediction Can Be Used for the Recognition of Protein Interaction Interfaces in Soluble Proteins.
439-445
- Kazim Ali, Abad Ali Shah, Arshad Ali, Hafiz Farooq Ahmad:
A Bernoulli Process Approximation for the Reverse Translation of Protein to DNA/mRNA.
446-451
- Irina Medvedeva, Pavel Demenkov, Vladimir A. Ivanisenko, Nikolay A. Kolchanov:
Analysis of Protein Functional Site Distribution on Gene Structure.
452-455
- Zhong-Hui Duan, Dianne Perez, Ting Shi:
Understanding the relationship between human protein sequences and their biological functions.
456-462
- Prashanth Suravajhala, Tarun Gupta, Arun Gupta, Renuka Suravajhala, Shirish Siddamshetty:
Identifying the Function of Hypothetical Proteins: A Bioinformatical Approach.
463-470
Algorithms and Models + Intelligent Drug Design
- A. Keith Dunker:
Protein Intrinsic Disorder, Cell Signaling, Drug Discovery, and Alternative Splicing.
471-472
- Richard Samade, Boris Kogan:
Calcium Alternans in Cardiac Cell Mathematical Models.
473-479
- Mila E. Majster-Cederbaum, Nils Semmelrock, Verena Wolf:
Interaction Models for Biochemical Reactions.
480-486
- Alexei Skvortsov, Russell Connell, Peter Dawson, Ralph Gailis:
Epidemic Spread Modeling: Alignment of Agent-Based Simulation with a Simple Mathematical Model.
487-490
- C. W. Kim, M. U. D. Zia, S. H. Woo, J. H. Lee, H. J. Park, I. Y. Park, M. N. Kim, C. H. Won, J. H. Cho:
Automatic Detection Algorithm for Residual Quantity of Ringer's Solution.
491-496
- Kishore R. Sakharkar, Meena K. Sakharkar:
Searching for Drug Targets in Salmonella Genomes.
497-503
- Bhagwan D. Aggarwala:
On an ODE Model for Development to AIDS.
504-509
- Gregory Vert, Radhika Radhakrishnan:
A Logical Data Model for Genome Data.
510-514
- Jack Y. Yang, Guo-Zheng Li, Li-Xin Liu, Mary Qu Yang:
Classification of Brain Glioma by Using Neural Networks Ensemble with Multi-Task Learning.
515-522
System Modeling and Genome Analysis
- Tian Xia, Jie Li, Eve Syrkin Wurtele, Xun Gu:
A tool for comprehensive analysis of protein interaction networks.
523-527
- Jennifer L. Neary, Anthony Montanez, Timothy G. Lilburn, Yufeng Wang:
Metabolic pathway complements of Five Francisella strains.
528-532
- Travis Hestilow, James Perez, Yufei Huang:
Clustering Of Gene Expression Data Based On Shape Similarity.
533-539
- Jianying Gu, Jennifer L. Neary, Audrey Moshfeghian, Hong Cai, Sos S. Agaian, Timothy G. Lilburn, Yufeng Wang:
Lineage Specific Expansion in Vibrio Species.
540-544
- Padmanabhan Mahadevan, Donald Seto:
Comparative genomics using CoreGenes to analyze small bacterial genomes, with an application for the annotation of hypothetical proteins.
545-552
Keynote Lecture
Genomics I
Genomics II
Genomics III
- Wei Li, Jason S. Carroll, Myles Brown, X. Shirley Liu:
xMAN: extreme MApping of oligoNucleotides.
631-637
- Jing Wu:
Improving the Specificity of Exon Prediction Using Genomic Homology.
638-642
- Xin Yan, Tian Zheng:
Discriminant Analysis Using Multigene Expression Profiles in Classification of Breast Cancer.
643-649
- Chieh-Chun Chen, Xinguang Zhu, Sheng Zhong:
Selection of Thermodynamic Models for Combinatorial Control of Multiple Transcription Factors in Early Differentiation of Embryonic Stem Cells.
650-656
- Guohua Wang, Xin Wang, Lang Li, Kenneth P. Nephew, Howard J. Edenberg, Feng Zhou, Yunlong Liu:
Identification of Transcription Factor and microRNA Binding Sites from Array-derived Gene Expression Data.
657-663
- Xin Wang, Guohua Wang, Changyu Shen, Lang Li, Xinguo Wang, Sean Mooney, Howard J. Edenberg, Jeremy Sanford, Yunlong Liu:
Refining Detection of RNA-Protein Binding Regions by Pyrosequencing of RNA Fragments.
664-672
Genomics IV
- Bhanu Vanteru, Jahangheer S. Shaik, Mohammed Yeasin:
Semantically Linking PubMed to the Gene Ontology for Ontology-based Browsing.
673-678
- Vinhthuy T. Phan, Allen Thomas, Carrie Hayes Sutter:
Stability of RNA Structural Motifs and its Influence on Editing Efficiency by ADARS.
679-685
- Jian Wu, Nataliya Lenchik, Ivan Gerling:
Microarray Data Analysis and Mining Strategy to Reduce Type 1 and Type 2 Errors.
686-692
- Min Xu, Ming-Chih J. Kao, Juan Nunez-Iglesias, Joseph Nevins, Mike West, Xianghong Jasmine Zhou:
Characterizing Disease-specific Pathways and Their Coordination by Integrative Microarray Analysis with Application to Cancer.
693-699
- Mengxia Zhu, Qishi Wu:
A Parallel Computing Approach to Decipher Transcription Network for Large-scale Microarray Datasets.
700-706
- Yunfeng Yang, Daniel Harris, Feng Luo, Liyou Wu, Andrea Parsons, Anthony Palumbo, Jizhong Zhou:
Physiological and Transcriptomic Analyses to Characterize the Function of Fur and Iron Response in Shewanella Oneidensis.
707-713
- Eunseog Youn:
Improving a Protein Structure Similarity Measure Using Inter-Residue Distance Matrices.
714-720
Late Papers
- Debebe Asefa, Dinesh P. Mital, Syed Haque, Shankar Srinivasan:
Activation Points Extraction and Noise Removal of fMRI Signal Using Novel Local Cosine Technique.
721-726
- Dharmendra Kumar, Yashoda Mittal:
Analysis of the Database of Cystic Fibrosis for Ascertaining Test Systems.
727-730
- Feng Yue, Jijun Tang:
Three Sequence Alignment and Ancestor Inference with Affine Gap Costs.
731-737
- Hyunjung Shin, Andreas Martin Lisewski, Olivier Lichtarge:
Graph-Based Protein Functional Classification.
738-744
- Guy Lingani, Zengjian Hu, Legand L. Burge III, William M. Southerland:
Enhancing Biomedical Knowledge through Computational Methods: Howard University Center for Computational Biology and Bioinformatics.
745-747
- M. Reza Mashinchi, M. Hadi Mashinchi, Ali Selamat:
New Approach for Language Identification Based on DNA Computing.
748-752
- Efthimios Motakis, Anna V. Ivshina, Vladimir A. Kuznetsov:
Identification of Essential Genes and Gene Pairs Associated with Survival Time of Cancer Patients.
753-759
- Aaron Skewes, Michael Quance, Catherine Putonti, Viacheslav Fofanov, Yuriy Fofanov:
Statistical Properties of Short n-mers Located in the One Mismatch Area of Microbial Genomes.
760-766
- Yufang Jin:
Stability Analysis of Genetic Regulatory Network with Additive Noises.
767-773
- Nahed Solouma:
A Novel Algorithm to Reduce the Size and Processing Time of Nucleotide Sequences.
774-780
- Chen Feng, Catherine Putonti, Michael Quance, Stephen Huff, Andrey Belokrylov, S. Lennart Johnsson, Krishna Jayaraman, Michael Hogan, Yuriy Fofanov:
Developing Assays for the Detection of Influenza in Human Samples.
781-
Copyright © Fri Mar 12 17:06:56 2010
by Michael Ley (ley@uni-trier.de)
